Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna epoxyqueuosine(34) reductase queg | DRW42_22145 | Not Available | Positive | 5153362 - 5154294 | 35267.0 |
| peptidase | DRW42_22150 | Not Available | Negative | 5154404 - 5156263 | 70012.5 |
| dna polymerase iii subunit epsilon | DRW42_22155 | Not Available | Negative | 5156362 - 5157315 | 36274.4 |
| duf3857 domain-containing protein | DRW42_22160 | Not Available | Positive | 5157500 - 5159473 | 75149.6 |
| hypothetical protein | DRW42_22165 | Not Available | Positive | 5159475 - 5161382 | 72146.8 |
| hypothetical protein | DRW42_22170 | Not Available | Positive | 5161866 - 5162651 | 28786.2 |
| hypothetical protein | DRW42_22175 | Not Available | Negative | 5162648 - 5163091 | 17059.0 |
| dna topoisomerase iii | DRW42_22180 | Not Available | Positive | 5163295 - 5165148 | 69292.2 |
| hypothetical protein | DRW42_22185 | Not Available | Negative | 5165283 - 5165660 | 14066.2 |
| ighmbp2 family helicase | DRW42_22190 | Not Available | Negative | 5165830 - 5167740 | 71548.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

