Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DRW42_22095 | Not Available | Negative | 5140090 - 5140746 | 24621.6 |
| yqge/algh family protein | DRW42_22100 | Not Available | Negative | 5140864 - 5141427 | 21230.1 |
| pyridoxamine 5'-phosphate oxidase | DRW42_22105 | Not Available | Positive | 5141474 - 5142124 | 24862.6 |
| hypothetical protein | DRW42_22110 | Not Available | Negative | 5142825 - 5143751 | 32069.1 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DRW42_22115 | Not Available | Negative | 5143762 - 5145375 | 58309.2 |
| susc/raga family tonb-linked outer membrane protein | DRW42_22120 | Not Available | Negative | 5145375 - 5148485 | 112645.0 |
| 3-hydroxybutyryl-coa dehydrogenase | DRW42_22125 | Not Available | Positive | 5149046 - 5149939 | 32174.1 |
| holliday junction branch migration dna helicase ruvb | DRW42_22130 | Not Available | Positive | 5149972 - 5150994 | 37630.2 |
| carbon-nitrogen hydrolase | DRW42_22135 | Not Available | Positive | 5151448 - 5152956 | 57632.2 |
| hypothetical protein | DRW42_22140 | Not Available | Negative | 5153017 - 5153223 | 7532.99 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

