Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vapc toxin family pin domain ribonuclease | DRW42_22045 | Not Available | Positive | 5131791 - 5132180 | 14403.5 |
| hypothetical protein | DRW42_22050 | Not Available | Positive | 5132373 - 5132636 | 10009.0 |
| radical sam protein | DRW42_22055 | Not Available | Negative | 5132828 - 5135044 | 84562.0 |
| hypothetical protein | DRW42_22060 | Not Available | Positive | 5135240 - 5135953 | 27896.0 |
| hypothetical protein | DRW42_22065 | Not Available | Negative | 5135944 - 5136270 | 12654.7 |
| duf433 domain-containing protein | DRW42_22070 | Not Available | Negative | 5136254 - 5136496 | 8836.64 |
| aminoacetone oxidase family fad-binding enzyme | DRW42_22075 | Not Available | Negative | 5136781 - 5137971 | 43750.6 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | DRW42_22080 | Not Available | Positive | 5138026 - 5139165 | 42598.4 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | DRW42_22085 | Not Available | Positive | 5139219 - 5139725 | 17522.2 |
| transcriptional regulator | DRW42_22090 | Not Available | Negative | 5139880 - 5140080 | 7274.31 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

