Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-aspartyl-peptidase | DRW42_21895 | Not Available | Positive | 5096235 - 5097260 | 36196.8 |
| cyanophycinase | DRW42_21900 | Not Available | Positive | 5097260 - 5098099 | 30643.3 |
| glutamate/aspartate:proton symporter gltp | DRW42_21905 | Not Available | Positive | 5098537 - 5099787 | 44762.4 |
| 23s rrna (adenine(1618)-n(6))-methyltransferase rlmf | DRW42_21910 | Not Available | Positive | 5099992 - 5100960 | 36687.7 |
| vit family protein | DRW42_21915 | Not Available | Negative | 5101267 - 5101956 | 24083.4 |
| cupin domain-containing protein | DRW42_21920 | Not Available | Negative | 5102025 - 5102450 | 15186.3 |
| succinate--coa ligase subunit alpha | DRW42_21925 | Not Available | Positive | 5102780 - 5103652 | 29928.6 |
| methionine-r-sulfoxide reductase | DRW42_21930 | Not Available | Positive | 5104215 - 5104718 | 18595.2 |
| septal ring lytic transglycosylase rlpa family lipoprotein | DRW42_21935 | Not Available | Positive | 5104863 - 5105243 | 14152.3 |
| ribonucleoside-diphosphate reductase | DRW42_21940 | Not Available | Positive | 5105699 - 5106670 | 37350.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

