Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine dehydratase | DRW42_21590 | Not Available | Negative | 5022026 - 5023276 | 45864.5 |
| 2-isopropylmalate synthase | DRW42_21595 | Not Available | Negative | 5023686 - 5024846 | 42615.9 |
| 3-isopropylmalate dehydrogenase | DRW42_21600 | Not Available | Negative | 5024857 - 5025948 | 40276.5 |
| molybdenum abc transporter atp-binding protein | DRW42_21605 | Not Available | Negative | 5026075 - 5027541 | 54569.0 |
| 3-isopropylmalate dehydratase small subunit | DRW42_21610 | Not Available | Negative | 5027666 - 5028253 | 21654.4 |
| antibiotic biosynthesis monooxygenase | DRW42_21615 | Not Available | Negative | 5028363 - 5028650 | 11082.4 |
| 3-isopropylmalate dehydratase large subunit | DRW42_21620 | Not Available | Negative | 5028751 - 5030157 | 50800.8 |
| ketol-acid reductoisomerase | DRW42_21625 | Not Available | Negative | 5030221 - 5031702 | 54253.4 |
| dinb family protein | DRW42_21630 | Not Available | Negative | 5031857 - 5032318 | 17139.5 |
| voc family protein | DRW42_21635 | Not Available | Negative | 5032332 - 5032742 | 16003.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

