Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DRW42_21540 | Not Available | Positive | 5013186 - 5013932 | 28983.9 |
| protoporphyrinogen ix oxidase | DRW42_21545 | Not Available | Positive | 5013929 - 5014489 | 21547.4 |
| hypothetical protein | DRW42_21550 | Not Available | Positive | 5014680 - 5015837 | 44753.2 |
| rna polymerase subunit sigma-70 | DRW42_21555 | Not Available | Positive | 5016182 - 5016751 | 21695.4 |
| hypothetical protein | DRW42_21560 | Not Available | Positive | 5016732 - 5017490 | 28120.1 |
| port family protein | DRW42_21565 | Not Available | Positive | 5017695 - 5018513 | 30820.8 |
| abc transporter atp-binding protein | DRW42_21570 | Not Available | Positive | 5019099 - 5020091 | 37188.9 |
| hypothetical protein | DRW42_21575 | Not Available | Negative | 5020235 - 5020648 | 15362.1 |
| duf4230 domain-containing protein | DRW42_21580 | Not Available | Positive | 5020785 - 5021345 | 21097.8 |
| cupin domain-containing protein | DRW42_21585 | Not Available | Negative | 5021551 - 5021910 | 13370.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

