Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamyl-trna reductase | DRW42_21490 | Not Available | Positive | 5003303 - 5004535 | 46878.7 |
| hypothetical protein | DRW42_21495 | Not Available | Positive | 5004735 - 5004935 | 7110.75 |
| hydroxymethylbilane synthase | DRW42_21500 | Not Available | Positive | 5005209 - 5006792 | 58842.6 |
| porphobilinogen synthase | DRW42_21505 | Not Available | Positive | 5007011 - 5007979 | 35949.1 |
| glutamate-1-semialdehyde-2,1-aminomutase | DRW42_21510 | Not Available | Positive | 5008074 - 5009444 | 49695.6 |
| two-component sensor histidine kinase | DRW42_21515 | Not Available | Positive | 5009575 - 5010441 | 32529.8 |
| dna-binding response regulator | DRW42_21520 | Not Available | Positive | 5010450 - 5011154 | 27268.1 |
| hypothetical protein | DRW42_21525 | Not Available | Positive | 5011154 - 5011669 | 19712.0 |
| uroporphyrinogen decarboxylase | DRW42_21530 | Not Available | Positive | 5011870 - 5012895 | 38296.5 |
| hypothetical protein | DRW42_21535 | Not Available | Positive | 5012950 - 5013183 | 8729.72 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

