Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| wxcm-like domain-containing protein | DRW42_21340 | Not Available | Positive | 4970471 - 4970878 | 15683.4 |
| wxcm-like domain-containing protein | DRW42_21345 | Not Available | Positive | 4970878 - 4971285 | 15256.2 |
| carboxylate--amine ligase | DRW42_21350 | Not Available | Positive | 4971286 - 4972350 | 39408.4 |
| nad(p)-dependent oxidoreductase | DRW42_21355 | Not Available | Positive | 4972350 - 4973237 | 33404.5 |
| had family hydrolase | DRW42_21360 | Not Available | Positive | 4973234 - 4973845 | 23840.4 |
| acyltransferase | DRW42_21365 | Not Available | Positive | 4973848 - 4974462 | 22151.3 |
| aminotransferase | DRW42_21370 | Not Available | Positive | 4974479 - 4975579 | 41051.6 |
| o-antigen translocase | DRW42_21375 | Not Available | Positive | 4975589 - 4976857 | 47221.6 |
| glycosyltransferase | DRW42_21380 | Not Available | Positive | 4977024 - 4978082 | 40463.7 |
| hypothetical protein | DRW42_21385 | Not Available | Positive | 4978090 - 4979022 | 36161.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

