Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3109 domain-containing protein | DRW42_21290 | Not Available | Positive | 4959261 - 4959824 | 21408.7 |
| dtdp-glucose 4,6-dehydratase | DRW42_21295 | Not Available | Positive | 4960035 - 4961087 | 39917.5 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | DRW42_21300 | Not Available | Positive | 4961087 - 4961635 | 20534.4 |
| dtdp-4-dehydrorhamnose reductase | DRW42_21305 | Not Available | Positive | 4961632 - 4962492 | 31452.6 |
| glucose-1-phosphate thymidylyltransferase | DRW42_21310 | Not Available | Positive | 4962564 - 4963424 | 31309.2 |
| vi polysaccharide biosynthesis protein vipa/tvib | DRW42_21315 | Not Available | Positive | 4963692 - 4964975 | 47132.9 |
| gdp-mannose 4,6-dehydratase | DRW42_21320 | Not Available | Positive | 4965041 - 4966177 | 43061.8 |
| histidinol phosphatase | DRW42_21325 | Not Available | Positive | 4966389 - 4967129 | 27997.8 |
| hypothetical protein | DRW42_21330 | Not Available | Positive | 4967296 - 4968102 | 29151.0 |
| capsular biosynthesis protein | DRW42_21335 | Not Available | Positive | 4968116 - 4970467 | 87828.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

