Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DRW42_00140 | Not Available | Negative | 31686 - 31892 | 7458.2 |
| pas domain-containing sensor histidine kinase | DRW42_00145 | Not Available | Positive | 32478 - 34481 | 74399.5 |
| hypothetical protein | DRW42_00150 | Not Available | Positive | 35175 - 35549 | 14262.9 |
| yihy/virulence factor brkb family protein | DRW42_00155 | Not Available | Positive | 35533 - 36951 | 51716.3 |
| mechanosensitive ion channel protein | DRW42_00160 | Not Available | Positive | 36976 - 39324 | 86868.8 |
| hypothetical protein | DRW42_00165 | Not Available | Negative | 39961 - 40167 | 7308.73 |
| putative sulfate exporter family transporter | DRW42_00170 | Not Available | Negative | 40582 - 41562 | 34864.7 |
| lysr family transcriptional regulator | DRW42_00175 | Not Available | Positive | 41737 - 42633 | 34124.6 |
| abc transporter permease | DRW42_00180 | Not Available | Negative | 42903 - 43832 | 34329.9 |
| abc transporter atp-binding protein | DRW42_00185 | Not Available | Negative | 43870 - 44874 | 36887.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

