Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mbl fold metallo-hydrolase | DRW42_01695 | Not Available | Negative | 380422 - 381321 | 33431.4 |
| hypothetical protein | DRW42_01700 | Not Available | Negative | 381396 - 381599 | 7420.5 |
| hypothetical protein | DRW42_01705 | Not Available | Negative | 381717 - 381920 | 8029.57 |
| cysteine desulfurase | DRW42_01710 | Not Available | Negative | 382539 - 383687 | 41853.0 |
| phosphoglucosamine mutase | DRW42_01715 | Not Available | Negative | 383816 - 385201 | 50048.9 |
| sam-dependent methyltransferase | DRW42_01720 | Not Available | Positive | 385517 - 386248 | 28789.3 |
| phosphatase pap2 family protein | DRW42_01725 | Not Available | Positive | 386245 - 386808 | 21559.0 |
| zinc/iron permease | DRW42_01730 | Not Available | Positive | 386812 - 387528 | 26226.9 |
| uma2 family endonuclease | DRW42_01735 | Not Available | Positive | 387705 - 388298 | 22814.0 |
| uma2 family endonuclease | DRW42_01740 | Not Available | Positive | 388446 - 389048 | 23305.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

