Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)/fad-dependent oxidoreductase | DRW42_01645 | Not Available | Positive | 368483 - 369802 | 48878.2 |
| hydroxymethylglutaryl-coa lyase | DRW42_01650 | Not Available | Positive | 370137 - 370997 | 31534.8 |
| gnat family n-acetyltransferase | DRW42_01655 | Not Available | Negative | 371249 - 371671 | 16016.0 |
| low affinity iron permease family protein | DRW42_01660 | Not Available | Negative | 371646 - 372152 | 18700.4 |
| class ii fructose-bisphosphate aldolase | DRW42_01665 | Not Available | Negative | 372295 - 373374 | 39883.3 |
| acetyl-coa carboxylase carboxyl transferase subunit beta | DRW42_01670 | Not Available | Positive | 373846 - 374691 | 31194.0 |
| hypothetical protein | DRW42_01675 | Not Available | Positive | 375389 - 375769 | 14008.2 |
| peptidase m28 | DRW42_01680 | Not Available | Positive | 376046 - 377593 | 56395.0 |
| cytochrome d ubiquinol oxidase subunit ii | DRW42_01685 | Not Available | Negative | 377747 - 378751 | 37542.1 |
| cytochrome ubiquinol oxidase subunit i | DRW42_01690 | Not Available | Negative | 378865 - 380184 | 48637.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

