Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna alkylation repair protein | DRW42_01595 | Not Available | Negative | 357409 - 358083 | 25563.7 |
| hypothetical protein | DRW42_01600 | Not Available | Positive | 358597 - 359853 | 46312.1 |
| o-succinylhomoserine sulfhydrylase | DRW42_01605 | Not Available | Negative | 359923 - 361089 | 43110.5 |
| osmc family peroxiredoxin | DRW42_01610 | Not Available | Negative | 361268 - 361684 | 15340.6 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | DRW42_01615 | Not Available | Negative | 361798 - 362601 | 29772.9 |
| thymidylate synthase | DRW42_01620 | Not Available | Positive | 362864 - 363658 | 30161.1 |
| hypothetical protein | DRW42_01625 | Not Available | Positive | 363679 - 363882 | 7336.91 |
| type ii toxin-antitoxin system yafq family toxin | DRW42_01630 | Not Available | Positive | 363884 - 364156 | 10898.2 |
| dihydrofolate reductase | DRW42_01635 | Not Available | Positive | 364183 - 364674 | 18646.2 |
| protein translocase subunit secdf | DRW42_01640 | Not Available | Positive | 365039 - 368020 | 107414.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

