Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | DRW42_01545 | Not Available | Negative | 344866 - 345501 | 23980.0 |
| transmembrane glycosyltransferase | DRW42_01550 | Not Available | Negative | 345527 - 346627 | 42675.4 |
| trna guanosine(34) transglycosylase tgt | DRW42_01555 | Not Available | Positive | 346787 - 347917 | 42457.4 |
| yjgp/yjgq family permease | DRW42_01560 | Not Available | Positive | 347919 - 349022 | 41901.6 |
| eama family transporter | DRW42_01565 | Not Available | Positive | 349024 - 349902 | 32736.3 |
| hypothetical protein | DRW42_01570 | Not Available | Positive | 352218 - 355022 | 107387.0 |
| hypothetical protein | DRW42_01575 | Not Available | Positive | 355026 - 355307 | 10346.6 |
| gxxexxy protein | DRW42_01580 | Not Available | Positive | 355465 - 355857 | 15123.5 |
| hypothetical protein | DRW42_01585 | Not Available | Negative | 356014 - 356319 | 11052.6 |
| pirin family protein | DRW42_01590 | Not Available | Negative | 356451 - 357173 | 26400.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

