Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold shock domain-containing protein | DRW42_01295 | Not Available | Negative | 285089 - 285277 | 6922.18 |
| hypothetical protein | DRW42_01300 | Not Available | Negative | 285399 - 285689 | 11240.6 |
| smp-30/gluconolactonase/lre family protein | DRW42_01305 | Not Available | Negative | 286366 - 287256 | 33105.3 |
| abc transporter atp-binding protein | DRW42_01310 | Not Available | Negative | 287348 - 289108 | 65060.1 |
| abc transporter atp-binding protein | DRW42_01315 | Not Available | Negative | 289092 - 290828 | 63683.3 |
| hypothetical protein | DRW42_01320 | Not Available | Negative | 291179 - 291811 | 23840.0 |
| tolc family protein | DRW42_01325 | Not Available | Negative | 292998 - 294404 | 50750.3 |
| hydrophobe/amphiphile efflux-1 family rnd transporter | DRW42_01330 | Not Available | Negative | 294391 - 297594 | 115601.0 |
| efflux transporter periplasmic adaptor subunit | DRW42_01335 | Not Available | Negative | 297619 - 298821 | 42531.2 |
| tetr/acrr family transcriptional regulator | DRW42_01340 | Not Available | Negative | 298890 - 299495 | 23266.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

