Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DRW42_01045 | Not Available | Negative | 229165 - 232221 | 111968.0 |
| hypothetical protein | DRW42_01050 | Not Available | Positive | 232749 - 233588 | 31615.0 |
| sodium transporter | DRW42_01055 | Not Available | Negative | 233744 - 235399 | 60059.4 |
| fad-binding dehydrogenase | DRW42_01060 | Not Available | Negative | 235434 - 237713 | 84933.2 |
| beta-galactosidase | DRW42_01065 | Not Available | Negative | 237720 - 239714 | 75794.3 |
| ragb/susd family nutrient uptake outer membrane protein | DRW42_01070 | Not Available | Negative | 239739 - 241238 | 55455.8 |
| susc/raga family tonb-linked outer membrane protein | DRW42_01075 | Not Available | Negative | 241274 - 244243 | 106957.0 |
| laci family transcriptional regulator | DRW42_01080 | Not Available | Positive | 244551 - 245564 | 37844.0 |
| carbohydrate-binding protein | DRW42_01085 | Not Available | Negative | 246216 - 247625 | 53762.1 |
| n-acetyltransferase | DRW42_01090 | Not Available | Negative | 247739 - 248041 | 11687.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

