Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| proline iminopeptidase | DRW42_00895 | Not Available | Positive | 188878 - 189912 | 39153.3 |
| hypothetical protein | DRW42_00900 | Not Available | Positive | 189979 - 190236 | 9842.15 |
| mbl fold metallo-hydrolase | DRW42_00905 | Not Available | Positive | 190307 - 191095 | 28459.0 |
| duf1348 domain-containing protein | DRW42_00910 | Not Available | Positive | 191121 - 191531 | 16410.2 |
| alpha/beta hydrolase | DRW42_00915 | Not Available | Positive | 191776 - 192630 | 32450.9 |
| pyridoxamine 5'-phosphate oxidase | DRW42_00920 | Not Available | Negative | 192674 - 193276 | 23346.1 |
| type i glyceraldehyde-3-phosphate dehydrogenase | DRW42_00925 | Not Available | Negative | 193302 - 194285 | 35620.7 |
| hypothetical protein | DRW42_00930 | Not Available | Negative | 194671 - 197178 | 94591.0 |
| hypothetical protein | DRW42_00935 | Not Available | Positive | 197443 - 199707 | 86046.2 |
| sigma-54-dependent fis family transcriptional regulator | DRW42_00940 | Not Available | Positive | 199723 - 201687 | 74035.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

