Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf296 domain-containing protein | DRW42_00690 | Not Available | Positive | 147150 - 147710 | 20363.6 |
| hypothetical protein | DRW42_00695 | Not Available | Negative | 147728 - 148051 | 12593.2 |
| type 1 glutamine amidotransferase domain-containing protein | DRW42_00700 | Not Available | Negative | 148430 - 149122 | 24641.9 |
| duf3891 domain-containing protein | DRW42_00705 | Not Available | Negative | 149401 - 150114 | 27179.4 |
| dead/deah box helicase | DRW42_00710 | Not Available | Negative | 150195 - 151724 | 57144.3 |
| excinuclease abc subunit a | DRW42_00715 | Not Available | Positive | 151899 - 154403 | 90990.2 |
| hsp20/alpha crystallin family protein | DRW42_00720 | Not Available | Positive | 154768 - 155208 | 16356.2 |
| hypothetical protein | DRW42_00725 | Not Available | Positive | 155290 - 155598 | 11418.1 |
| response regulator | DRW42_00730 | Not Available | Positive | 155698 - 156132 | 16305.1 |
| hypothetical protein | DRW42_00735 | Not Available | Negative | 156361 - 156543 | 6465.93 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

