Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DRW42_00640 | Not Available | Negative | 136741 - 138072 | 50235.3 |
| glycosyltransferase family 4 protein | DRW42_00645 | Not Available | Positive | 138349 - 139419 | 39790.7 |
| hypothetical protein | DRW42_00650 | Not Available | Positive | 139421 - 140467 | 38376.5 |
| hypothetical protein | DRW42_00655 | Not Available | Negative | 140464 - 141279 | 30588.9 |
| response regulator | DRW42_00660 | Not Available | Negative | 141848 - 142210 | 13445.4 |
| pas domain-containing sensor histidine kinase | DRW42_00665 | Not Available | Negative | 142200 - 143747 | 58703.7 |
| 2'-5' rna ligase family protein | DRW42_00670 | Not Available | Positive | 144266 - 144757 | 18949.0 |
| hypothetical protein | DRW42_00675 | Not Available | Positive | 145246 - 145869 | 23521.2 |
| hypothetical protein | DRW42_00680 | Not Available | Positive | 145881 - 146144 | 10075.4 |
| formamidopyrimidine-dna glycosylase | DRW42_00685 | Not Available | Positive | 146157 - 146927 | 28509.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

