Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyltransferase | DRW42_00545 | Not Available | Negative | 116804 - 117895 | 41906.0 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 118913 - 119309 | Not Available |
| glycosyltransferase family 1 protein | DRW42_00550 | Not Available | Negative | 117899 - 119146 | 46792.1 |
| hypothetical protein | DRW42_00555 | Not Available | Negative | 119133 - 120287 | 43981.1 |
| o-antigen ligase domain-containing protein | DRW42_00560 | Not Available | Negative | 120387 - 121643 | 46975.1 |
| lipopolysaccharide biosynthesis protein | DRW42_00565 | Not Available | Negative | 121677 - 123821 | 80030.4 |
| hypothetical protein | DRW42_00570 | Not Available | Negative | 123823 - 124503 | 25522.6 |
| sugar transferase | DRW42_00575 | Not Available | Negative | 124537 - 125610 | 41276.3 |
| two-component system response regulator | DRW42_00580 | Not Available | Negative | 125610 - 126014 | 15205.8 |
| serine acetyltransferase | DRW42_00585 | Not Available | Negative | 126225 - 126767 | 20004.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

