Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxyacyl-coa dehydrogenase | DRW42_05195 | Not Available | Positive | 1232573 - 1234978 | 89046.5 |
| acetyl-coa c-acyltransferase | DRW42_05200 | Not Available | Positive | 1235153 - 1236328 | 41536.3 |
| four helix bundle protein | DRW42_05205 | Not Available | Positive | 1236432 - 1236782 | 13145.0 |
| acyl-coa dehydrogenase | DRW42_05210 | Not Available | Positive | 1236964 - 1238757 | 65728.0 |
| peptidylprolyl isomerase | DRW42_05215 | Not Available | Positive | 1238932 - 1239378 | 16045.4 |
| peptidylprolyl isomerase | DRW42_05220 | Not Available | Positive | 1239526 - 1240014 | 17609.2 |
| hypothetical protein | DRW42_05225 | Not Available | Positive | 1240018 - 1240935 | 33395.8 |
| hypothetical protein | DRW42_05230 | Not Available | Positive | 1241132 - 1242100 | 36137.4 |
| deoxyribodipyrimidine photo-lyase | DRW42_05235 | Not Available | Negative | 1242109 - 1243404 | 51309.5 |
| tigr01777 family protein | DRW42_05240 | Not Available | Negative | 1243625 - 1244527 | 33193.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

