Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tolc family protein | DRW42_05140 | Not Available | Negative | 1214723 - 1216033 | 48214.5 |
| acrb/acrd/acrf family protein | DRW42_05145 | Not Available | Negative | 1216035 - 1219145 | 114159.0 |
| efflux transporter periplasmic adaptor subunit | DRW42_05150 | Not Available | Negative | 1219148 - 1220245 | 38730.0 |
| peptidase m61 | DRW42_05155 | Not Available | Positive | 1220604 - 1222433 | 67513.5 |
| hypothetical protein | DRW42_05160 | Not Available | Negative | 1222574 - 1223038 | 16305.6 |
| long-chain fatty acid--coa ligase | DRW42_05165 | Not Available | Positive | 1223294 - 1225069 | 66445.2 |
| gamma-glutamyltransferase | DRW42_05170 | Not Available | Positive | 1225041 - 1226762 | 61775.8 |
| ompa family protein | DRW42_05180 | Not Available | Positive | 1229315 - 1230634 | 47228.9 |
| hypothetical protein | DRW42_05185 | Not Available | Negative | 1230971 - 1231948 | 37734.6 |
| marr family transcriptional regulator | DRW42_05190 | Not Available | Positive | 1232059 - 1232493 | 16462.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

