Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DRW42_05040 | Not Available | Positive | 1177225 - 1178811 | 58214.4 |
| hypothetical protein | DRW42_05045 | Not Available | Positive | 1178814 - 1179707 | 33641.8 |
| hypothetical protein | DRW42_05050 | Not Available | Positive | 1179719 - 1180522 | 29482.9 |
| hypothetical protein | DRW42_05055 | Not Available | Positive | 1181053 - 1181325 | 10039.6 |
| duf983 domain-containing protein | DRW42_05060 | Not Available | Positive | 1181330 - 1181725 | 15427.0 |
| duf2461 domain-containing protein | DRW42_05065 | Not Available | Positive | 1181984 - 1182646 | 25154.2 |
| hypothetical protein | DRW42_05070 | Not Available | Positive | 1182808 - 1183647 | 31243.8 |
| hypothetical protein | DRW42_05075 | Not Available | Negative | 1183796 - 1186387 | 100706.0 |
| hypothetical protein | DRW42_05080 | Not Available | Positive | 1186630 - 1200099 | 455282.0 |
| hypothetical protein | DRW42_05085 | Not Available | Positive | 1200137 - 1201138 | 35856.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

