Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme a synthase | DRW42_04990 | Not Available | Positive | 1166300 - 1167358 | 39700.4 |
| protoheme ix farnesyltransferase | DRW42_04995 | Not Available | Positive | 1167371 - 1168279 | 33759.4 |
| heme-copper oxidase subunit iii | DRW42_05000 | Not Available | Positive | 1168295 - 1168861 | 21024.3 |
| cytochrome oxidase subunit iii | DRW42_05005 | Not Available | Positive | 1168893 - 1169606 | 27176.4 |
| caa(3)-type oxidase | DRW42_05010 | Not Available | Positive | 1169632 - 1169985 | 13490.0 |
| sco family protein | DRW42_05015 | Not Available | Positive | 1169985 - 1170680 | 26278.0 |
| duf420 domain-containing protein | DRW42_05020 | Not Available | Positive | 1170766 - 1171308 | 20368.9 |
| rna polymerase sigma-70 factor | DRW42_05025 | Not Available | Positive | 1171479 - 1172078 | 23029.9 |
| anti-sigma factor | DRW42_05030 | Not Available | Positive | 1172140 - 1173300 | 43213.8 |
| susc/raga family protein | DRW42_05035 | Not Available | Positive | 1173679 - 1177209 | 130136.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

