Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is110 family transposase | DRW42_00445 | Not Available | Positive | 98739 - 99743 | 37794.9 |
| hypothetical protein | DRW42_00450 | Not Available | Negative | 99923 - 100189 | 10201.9 |
| hypothetical protein | DRW42_00455 | Not Available | Negative | 100342 - 101055 | 27215.9 |
| hypothetical protein | DRW42_00460 | Not Available | Negative | 101221 - 101430 | 7526.75 |
| alpha-ketoglutarate-dependent dioxygenase alkb | DRW42_00465 | Not Available | Positive | 101457 - 102086 | 24555.0 |
| hypothetical protein | DRW42_00470 | Not Available | Negative | 102191 - 103315 | 40858.1 |
| hypothetical protein | DRW42_00475 | Not Available | Negative | 103439 - 103843 | 15590.8 |
| hypothetical protein | DRW42_00480 | Not Available | Positive | 104793 - 105005 | 8259.16 |
| hypothetical protein | DRW42_00485 | Not Available | Positive | 105392 - 105661 | 10410.5 |
| class i sam-dependent methyltransferase | DRW42_00490 | Not Available | Negative | 106121 - 106744 | 23523.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

