Flavobacterium tibetense str. YH5

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium tibetense str. YH5 is a rod-shaped bacterium characterized by the presence of flagella, which may contribute to its motility. This species is part of the Flavobacteriaceae family and is noted for its unique genetic and physiological traits. The genome of F. tibetense str. YH5 contains a single replicon, suggesting a streamlined genomic structure that could be advantageous for its adaptation and survival in specific environments. The designation of the strain is supported by its genomic accession number QLST00000000.1, which provides a reference point for researchers interested in its genetic makeup. The availability of genomic data allows for further exploration of its metabolic capabilities and ecological roles. In ecological terms, members of the Flavobacterium genus are often found in aquatic environments, where they play crucial roles in the degradation of organic matter. The motility conferred by its flagella may enhance its ability to navigate through these environments, facilitating its interaction with organic substrates and other microorganisms. This adaptation is vital for nutrient cycling and maintaining ecosystem health, particularly in freshwater habitats. Overall, Flavobacterium tibetense str. YH5 exemplifies the diversity and ecological significance of bacteria within the Flavobacteriaceae family.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium tibetense
StrainYH5

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium tibetense str. YH5
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium tibetense strain YH5 YH5_scaffold56, whole genome

Gene Summary

Adenine Count

913053 bp

Thymine Count

915343 bp

Guanine Count

456023 bp

Cytosine Count

453124 bp

Genome Length

2737708 bp

Protein-coding Genes

2534 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent clp protease atp-binding subunitDPN68_10120Not AvailablePositive2101882 - 210442895402.5
30s ribosomal protein s6--l-glutamate ligaseDPN68_10125Not AvailablePositive2104494 - 210586150284.0
restriction endonuclease subunit rDPN68_10130Not AvailablePositive2105947 - 2108676105041.0
hypothetical proteinDPN68_10135Not AvailablePositive2108681 - 21088606569.78
duf1304 domain-containing proteinDPN68_10140Not AvailablePositive2108857 - 210921913732.4
hypothetical proteinDPN68_10145Not AvailableNegative2109308 - 210976917782.4
histidine ammonia-lyaseDPN68_10150Not AvailableNegative2109803 - 211130555245.4
glycine cleavage system aminomethyltransferase gcvtDPN68_10155Not AvailablePositive2111470 - 211255239434.9
yebc/pmpr family dna-binding transcriptional regulatorDPN68_10160Not AvailablePositive2112846 - 211356527005.1
hypothetical proteinDPN68_10165Not AvailablePositive2113748 - 211454530755.2

Displaying genes 2021 – 2030 of 2591 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.