Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pectate lyase | DF947_04590 | Not Available | Negative | 1064846 - 1065880 | 38912.8 |
| glucuronyl hydrolase | DF947_04595 | Not Available | Negative | 1066126 - 1068057 | 71651.7 |
| glycoside hydrolase | DF947_04600 | Not Available | Negative | 1068067 - 1069734 | 60354.3 |
| pectin esterase | DF947_04605 | Not Available | Negative | 1069894 - 1070850 | 35836.1 |
| glycoside hydrolase | DF947_04610 | Not Available | Positive | 1071110 - 1072744 | 61083.8 |
| hypothetical protein | DF947_04615 | Not Available | Negative | 1072949 - 1073383 | 16421.0 |
| crp/fnr family transcriptional regulator | DF947_04620 | Not Available | Negative | 1073472 - 1074041 | 22562.3 |
| glpgli family protein | DF947_04625 | Not Available | Negative | 1074092 - 1074874 | 29767.7 |
| tonb-dependent receptor | DF947_04630 | Not Available | Negative | 1074879 - 1077668 | 104154.0 |
| hypothetical protein | DF947_04635 | Not Available | Positive | 1077967 - 1078608 | 23107.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

