Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DF947_04540 | Not Available | Positive | 1051521 - 1053119 | 56920.6 |
| gntr family transcriptional regulator | DF947_04545 | Not Available | Positive | 1053180 - 1053920 | 27652.6 |
| pectin esterase | DF947_04550 | Not Available | Positive | 1053917 - 1054963 | 38918.5 |
| nadp-dependent glyceraldehyde-3-phosphate dehydrogenase | DF947_04555 | Not Available | Negative | 1055033 - 1056658 | 60293.7 |
| mfs transporter | DF947_04560 | Not Available | Negative | 1056854 - 1058293 | 53451.8 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | DF947_04565 | Not Available | Negative | 1058315 - 1058974 | 23937.3 |
| carbohydrate kinase | DF947_04570 | Not Available | Negative | 1058974 - 1060023 | 38746.4 |
| glucuronate isomerase | DF947_04575 | Not Available | Negative | 1060137 - 1061537 | 53686.4 |
| altronate hydrolase | DF947_04580 | Not Available | Negative | 1061640 - 1063286 | 59658.1 |
| altronate oxidoreductase | DF947_04585 | Not Available | Negative | 1063288 - 1064799 | 56677.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

