Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DF947_04490 | Not Available | Positive | 1038430 - 1038984 | 21233.7 |
| hypothetical protein | DF947_04495 | Not Available | Positive | 1039340 - 1040116 | 28505.8 |
| hypothetical protein | DF947_04500 | Not Available | Positive | 1040222 - 1040854 | 23904.2 |
| hypothetical protein | DF947_04505 | Not Available | Negative | 1040851 - 1041741 | 34235.5 |
| mfs transporter | DF947_04510 | Not Available | Positive | 1041876 - 1043396 | 55729.0 |
| hypothetical protein | DF947_04515 | Not Available | Positive | 1043406 - 1043657 | 9333.74 |
| class i sam-dependent rrna methyltransferase | DF947_04520 | Not Available | Negative | 1043952 - 1045136 | 44025.6 |
| laci family transcriptional regulator | DF947_04525 | Not Available | Negative | 1045204 - 1046238 | 38756.6 |
| susc/raga family protein | DF947_04530 | Not Available | Positive | 1046507 - 1049692 | 117329.0 |
| ragb/susd family nutrient uptake outer membrane protein | DF947_04535 | Not Available | Positive | 1049714 - 1051510 | 66423.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

