Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nifu family protein | DF947_04190 | Not Available | Positive | 969080 - 969631 | 20146.8 |
| inositol monophosphatase | DF947_04195 | Not Available | Negative | 969705 - 970496 | 29823.8 |
| diacylglyceryl transferase | DF947_04200 | Not Available | Negative | 970556 - 971704 | 42671.9 |
| trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtab | DF947_04205 | Not Available | Negative | 971865 - 973187 | 49719.5 |
| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | DF947_04210 | Not Available | Negative | 973319 - 973891 | 21135.5 |
| hypothetical protein | DF947_04215 | Not Available | Positive | 974012 - 975112 | 41062.0 |
| crp/fnr family transcriptional regulator | DF947_04220 | Not Available | Negative | 975508 - 976128 | 24021.1 |
| duf421 domain-containing protein | DF947_04225 | Not Available | Positive | 976222 - 977004 | 29267.3 |
| hypothetical protein | DF947_04230 | Not Available | Positive | 977104 - 979641 | 95587.1 |
| hypothetical protein | DF947_04235 | Not Available | Negative | 979689 - 979886 | 7162.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

