Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crp/fnr family transcriptional regulator | DF947_04040 | Not Available | Negative | 940573 - 941187 | 24018.2 |
| tigr02757 family protein | DF947_04045 | Not Available | Negative | 941306 - 942157 | 33001.6 |
| cystathionine gamma-synthase | DF947_04050 | Not Available | Negative | 942244 - 943383 | 42135.5 |
| proline--trna ligase | DF947_04055 | Not Available | Negative | 943486 - 944958 | 55756.5 |
| hypothetical protein | DF947_04060 | Not Available | Positive | 945158 - 946075 | 33191.4 |
| hypothetical protein | DF947_04065 | Not Available | Positive | 946103 - 947608 | 55088.4 |
| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | DF947_04070 | Not Available | Negative | 947675 - 949510 | 67787.8 |
| dna starvation/stationary phase protection protein | DF947_04075 | Not Available | Negative | 949613 - 950092 | 18454.1 |
| hypothetical protein | DF947_04080 | Not Available | Positive | 950375 - 951889 | 55340.4 |
| uridine kinase | DF947_04085 | Not Available | Positive | 951892 - 952536 | 24641.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

