Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| haloacid dehalogenase | DF947_00340 | Not Available | Negative | 74792 - 75460 | 24776.6 |
| crp/fnr family transcriptional regulator | DF947_00345 | Not Available | Positive | 75583 - 76185 | 23088.2 |
| hypothetical protein | DF947_00350 | Not Available | Negative | 76182 - 76853 | 25955.8 |
| cold-shock protein | DF947_00355 | Not Available | Positive | 77069 - 77278 | 7937.62 |
| hypothetical protein | DF947_00360 | Not Available | Negative | 77296 - 77619 | 13397.3 |
| very short patch repair endonuclease | DF947_00365 | Not Available | Positive | 77647 - 78153 | 20003.3 |
| hypothetical protein | DF947_00370 | Not Available | Negative | 78189 - 78539 | 12677.9 |
| sterol desaturase family protein | DF947_00375 | Not Available | Positive | 78771 - 79988 | 47647.4 |
| lysoplasmalogenase | DF947_00380 | Not Available | Positive | 79978 - 80670 | 26235.1 |
| penicillin-binding protein 1c | DF947_00385 | Not Available | Negative | 80764 - 83139 | 89004.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

