Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| macrolide abc transporter atp-binding protein | DF947_03585 | Not Available | Negative | 822019 - 822777 | 27555.0 |
| asp-trna(asn)/glu-trna(gln) amidotransferase gatcab subunit c | DF947_03590 | Not Available | Negative | 822831 - 823121 | 11098.5 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | DF947_03595 | Not Available | Negative | 823123 - 823848 | 28242.4 |
| tryptophan--trna ligase | DF947_03600 | Not Available | Positive | 824467 - 825465 | 37802.1 |
| deoxynucleoside kinase | DF947_03605 | Not Available | Positive | 825582 - 826196 | 23707.2 |
| hypothetical protein | DF947_03610 | Not Available | Positive | 826269 - 826466 | 7956.72 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | DF947_03615 | Not Available | Positive | 826469 - 827257 | 29313.1 |
| marr family transcriptional regulator | DF947_03620 | Not Available | Negative | 827309 - 828262 | 36122.7 |
| hypothetical protein | DF947_03625 | Not Available | Positive | 828374 - 828946 | 21724.0 |
| hypothetical protein | DF947_03630 | Not Available | Positive | 828930 - 829556 | 24045.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

