Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosylmethionine--8-amino-7-oxononanoate transaminase | DF947_03535 | Not Available | Negative | 813125 - 814423 | 48337.1 |
| nudix hydrolase | DF947_03540 | Not Available | Negative | 814429 - 814884 | 17466.6 |
| cation diffusion facilitator family transporter | DF947_03545 | Not Available | Negative | 814871 - 815857 | 36954.1 |
| aspartate aminotransferase | DF947_03550 | Not Available | Positive | 816025 - 817167 | 41864.6 |
| abc transporter | DF947_03555 | Not Available | Negative | 817375 - 818616 | 45819.7 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | DF947_03560 | Not Available | Positive | 818817 - 819866 | 39934.1 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | DF947_03565 | Not Available | Positive | 819951 - 820616 | 25002.1 |
| lmo0937 family membrane protein | DF947_03570 | Not Available | Negative | 820727 - 820885 | 5527.31 |
| duf2795 domain-containing protein | DF947_03575 | Not Available | Negative | 821074 - 821295 | 8601.69 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | DF947_03580 | Not Available | Negative | 821381 - 821929 | 20822.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

