Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ighmbp2 family helicase | DF947_03435 | Not Available | Negative | 797342 - 799255 | 71817.6 |
| duf3037 domain-containing protein | DF947_03440 | Not Available | Negative | 799316 - 799699 | 14610.6 |
| aminotransferase class i and ii | DF947_03445 | Not Available | Negative | 799677 - 800474 | 30467.4 |
| hypothetical protein | DF947_03450 | Not Available | Negative | 800585 - 800773 | 6784.98 |
| hypothetical protein | DF947_03455 | Not Available | Positive | 800896 - 801273 | 14963.4 |
| ktsc domain-containing protein | DF947_03460 | Not Available | Positive | 801328 - 801531 | 7853.56 |
| endonuclease | DF947_03465 | Not Available | Positive | 801533 - 802270 | 28709.1 |
| isopentenyl-diphosphate delta-isomerase | DF947_03470 | Not Available | Negative | 802497 - 803012 | 19959.7 |
| phytoene synthase | DF947_03475 | Not Available | Negative | 803029 - 803865 | 32589.6 |
| merr family transcriptional regulator | DF947_03480 | Not Available | Negative | 803862 - 804755 | 34284.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

