Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3606 domain-containing protein | DF947_00290 | Not Available | Positive | 60919 - 61092 | 6412.51 |
| dna ligase d | DF947_00295 | Not Available | Positive | 61103 - 63802 | 102667.0 |
| transcription-repair coupling factor | DF947_00300 | Not Available | Positive | 63851 - 64147 | 11376.6 |
| tonb-dependent siderophore receptor | DF947_00305 | Not Available | Negative | 64214 - 66616 | 87152.9 |
| duf3095 domain-containing protein | DF947_00310 | Not Available | Positive | 66780 - 67946 | 43589.5 |
| hypothetical protein | DF947_00315 | Not Available | Positive | 68049 - 70073 | 76182.2 |
| nadph:quinone reductase | DF947_00320 | Not Available | Positive | 70246 - 71175 | 33501.4 |
| cation transporter | DF947_00325 | Not Available | Negative | 71212 - 72129 | 34216.5 |
| l-glyceraldehyde 3-phosphate reductase | DF947_00330 | Not Available | Negative | 72280 - 73275 | 37205.4 |
| galactose-1-epimerase | DF947_00335 | Not Available | Positive | 73554 - 74726 | 43015.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

