Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxamine 5'-phosphate oxidase | DF947_03335 | Not Available | Positive | 772514 - 773164 | 25323.1 |
| ragb/susd family nutrient uptake outer membrane protein | DF947_03340 | Not Available | Negative | 773621 - 775228 | 57236.3 |
| hypothetical protein | DF947_03345 | Not Available | Negative | 775240 - 778371 | 112438.0 |
| 3-hydroxybutyryl-coa dehydrogenase | DF947_03350 | Not Available | Positive | 778802 - 779695 | 32198.2 |
| holliday junction branch migration dna helicase ruvb | DF947_03355 | Not Available | Positive | 779727 - 780749 | 37568.2 |
| gxxexxy protein | DF947_03360 | Not Available | Negative | 780900 - 781277 | 14440.8 |
| carbon-nitrogen hydrolase | DF947_03365 | Not Available | Positive | 781419 - 782927 | 57556.9 |
| hypothetical protein | DF947_03370 | Not Available | Negative | 782999 - 783205 | 7536.05 |
| trna epoxyqueuosine(34) reductase queg | DF947_03375 | Not Available | Positive | 783330 - 784262 | 35412.1 |
| hypothetical protein | DF947_03380 | Not Available | Positive | 784290 - 784493 | 7689.32 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

