Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerol kinase | DF947_03235 | Not Available | Positive | 747409 - 748899 | 54423.1 |
| aquaporin | DF947_03240 | Not Available | Positive | 748926 - 749657 | 25724.9 |
| 3'-5' exonuclease | DF947_03245 | Not Available | Positive | 749844 - 750572 | 28369.1 |
| signal transduction protein | DF947_03250 | Not Available | Positive | 750562 - 752013 | 55583.4 |
| 50s ribosomal protein l20 | DF947_03255 | Not Available | Negative | 752102 - 752446 | 12995.0 |
| 50s ribosomal protein l35 | DF947_03260 | Not Available | Negative | 752524 - 752724 | 7327.19 |
| translation initiation factor if-3 | DF947_03265 | Not Available | Negative | 752754 - 753323 | 21451.3 |
| threonine--trna ligase | DF947_03270 | Not Available | Negative | 753339 - 755264 | 73125.2 |
| hypothetical protein | DF947_03275 | Not Available | Negative | 755586 - 756494 | 32930.6 |
| fe-s oxidoreductase | DF947_03280 | Not Available | Negative | 756616 - 757353 | 27542.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

