Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2fe-2s ferredoxin | DF947_02985 | Not Available | Negative | 700941 - 701564 | 22458.9 |
| duf480 domain-containing protein | DF947_02990 | Not Available | Positive | 701737 - 702384 | 24240.1 |
| beta-ketoacyl-[acyl-carrier-protein] synthase ii | DF947_02995 | Not Available | Negative | 702450 - 703709 | 44142.8 |
| duf2798 domain-containing protein | DF947_03000 | Not Available | Negative | 703706 - 703939 | 8723.16 |
| short-chain dehydrogenase | DF947_03005 | Not Available | Negative | 703951 - 704718 | 27823.4 |
| aromatic compound degradation protein paai | DF947_03010 | Not Available | Negative | 704730 - 705215 | 17544.5 |
| tetr/acrr family transcriptional regulator | DF947_03015 | Not Available | Negative | 705255 - 705842 | 21521.0 |
| arac family transcriptional regulator | DF947_03020 | Not Available | Positive | 706088 - 706999 | 35295.9 |
| short-chain dehydrogenase/reductase | DF947_03025 | Not Available | Positive | 707082 - 707915 | 29369.1 |
| short-chain dehydrogenase/reductase | DF947_03030 | Not Available | Positive | 708057 - 708908 | 30507.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

