Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna ligase | DF947_02735 | Not Available | Positive | 642506 - 644095 | 61172.0 |
| ligase-associated dna damage response dexh box helicase | DF947_02740 | Not Available | Positive | 644340 - 646817 | 93557.3 |
| ligase-associated dna damage response endonuclease pdem | DF947_02745 | Not Available | Positive | 646920 - 647558 | 24054.9 |
| thioredoxin | DF947_02750 | Not Available | Negative | 647560 - 647856 | 10886.3 |
| hypothetical protein | DF947_02755 | Not Available | Negative | 648020 - 648634 | 23368.0 |
| diapophytoene dehydrogenase | DF947_02760 | Not Available | Negative | 648659 - 650008 | 48761.6 |
| competence/damage-inducible protein a | DF947_02765 | Not Available | Negative | 650068 - 651309 | 45556.3 |
| hypothetical protein | DF947_02770 | Not Available | Negative | 651314 - 653974 | 98711.1 |
| n-acetylmuramoyl-l-alanine amidase | DF947_02775 | Not Available | Positive | 654049 - 654912 | 32315.9 |
| n-acetylmuramoyl-l-alanine amidase | DF947_02780 | Not Available | Positive | 654923 - 655702 | 28764.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

