Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| merr family transcriptional regulator | DF947_02685 | Not Available | Positive | 630830 - 631165 | 13073.9 |
| hypothetical protein | DF947_02690 | Not Available | Positive | 631261 - 632061 | 29141.9 |
| hypothetical protein | DF947_02695 | Not Available | Positive | 632051 - 634081 | 77719.0 |
| hypothetical protein | DF947_02700 | Not Available | Positive | 634085 - 636172 | 80764.1 |
| methylglutaconyl-coa hydratase | DF947_02705 | Not Available | Positive | 636174 - 636950 | 28509.2 |
| hypothetical protein | DF947_02710 | Not Available | Positive | 636975 - 637655 | 24286.1 |
| s9 family peptidase | DF947_02715 | Not Available | Positive | 637791 - 639956 | 81108.2 |
| duf3307 domain-containing protein | DF947_02720 | Not Available | Negative | 639991 - 640701 | 27005.9 |
| transcriptional regulator | DF947_02725 | Not Available | Negative | 640701 - 641312 | 22728.6 |
| ligase-associated dna damage response exonuclease | DF947_02730 | Not Available | Positive | 641469 - 642509 | 39045.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

