Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna pseudouridine synthase | DF947_02635 | Not Available | Negative | 619989 - 620711 | 27556.3 |
| phage tail protein | DF947_02640 | Not Available | Negative | 620862 - 621293 | 15955.1 |
| dna-binding response regulator | DF947_02645 | Not Available | Negative | 621414 - 622103 | 25943.6 |
| thioredoxin | DF947_02650 | Not Available | Negative | 622208 - 623320 | 41063.1 |
| asp-trna(asn)/glu-trna(gln) amidotransferase gatcab subunit b | DF947_02655 | Not Available | Negative | 623350 - 624807 | 53742.3 |
| aaa family atpase | DF947_02660 | Not Available | Negative | 624867 - 626054 | 44964.2 |
| hypothetical protein | DF947_02665 | Not Available | Positive | 626217 - 626813 | 22883.9 |
| hypothetical protein | DF947_02670 | Not Available | Positive | 626918 - 627430 | 19317.2 |
| hypothetical protein | DF947_02675 | Not Available | Positive | 627551 - 628054 | 19753.2 |
| alanine--trna ligase | DF947_02680 | Not Available | Negative | 628099 - 630714 | 98531.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

