Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | DF947_02440 | Not Available | Positive | 580000 - 581052 | 39669.5 |
| transporter | DF947_02445 | Not Available | Positive | 581052 - 581921 | 32041.0 |
| yigz family protein | DF947_02450 | Not Available | Positive | 581908 - 582522 | 23259.0 |
| phosphorylase | DF947_02455 | Not Available | Positive | 582548 - 583408 | 31356.8 |
| phage envelope protein | DF947_02460 | Not Available | Negative | 583552 - 583947 | 14766.2 |
| galactose-1-epimerase | DF947_02465 | Not Available | Negative | 583950 - 584996 | 39077.6 |
| rna methyltransferase | DF947_02470 | Not Available | Positive | 585168 - 585698 | 19722.7 |
| hypothetical protein | DF947_02475 | Not Available | Positive | 585713 - 586375 | 25384.7 |
| flagellar motor protein motb | DF947_02480 | Not Available | Positive | 586612 - 587952 | 47977.3 |
| atp-dependent helicase | DF947_02485 | Not Available | Negative | 588112 - 589410 | 48744.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

