Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biotin synthase biob | DF947_02390 | Not Available | Negative | 570825 - 571826 | 37170.6 |
| magnesium transporter | DF947_02395 | Not Available | Negative | 571872 - 573221 | 49839.8 |
| magnesium and cobalt transport protein cora | DF947_02400 | Not Available | Negative | 573297 - 574307 | 39667.7 |
| hypothetical protein | DF947_02405 | Not Available | Negative | 574422 - 575033 | 24250.1 |
| lauroyl acyltransferase | DF947_02410 | Not Available | Positive | 575073 - 575945 | 34152.0 |
| glycosyl transferase family 2 | DF947_02415 | Not Available | Positive | 575951 - 576964 | 38882.8 |
| hypothetical protein | DF947_02420 | Not Available | Negative | 576957 - 577679 | 27387.9 |
| type ii 3-dehydroquinate dehydratase | DF947_02425 | Not Available | Negative | 577684 - 578106 | 15437.6 |
| site-specific tyrosine recombinase xerd | DF947_02430 | Not Available | Positive | 578167 - 579066 | 34080.4 |
| peptide chain release factor n(5)-glutamine methyltransferase | DF947_02435 | Not Available | Negative | 579073 - 579978 | 34407.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

