Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3291 domain-containing protein | DF947_02240 | Not Available | Negative | 539856 - 540548 | 26769.5 |
| diguanylate cyclase | DF947_02245 | Not Available | Positive | 540742 - 541221 | 17484.1 |
| dna-3-methyladenine glycosylase | DF947_02250 | Not Available | Positive | 541235 - 541840 | 22474.0 |
| pyridoxamine 5'-phosphate oxidase | DF947_02255 | Not Available | Positive | 541896 - 542384 | 18374.7 |
| kynureninase | DF947_02260 | Not Available | Positive | 542451 - 543740 | 48492.2 |
| hypothetical protein | DF947_02265 | Not Available | Positive | 543771 - 544631 | 33083.5 |
| histone deacetylase | DF947_02270 | Not Available | Positive | 544631 - 545533 | 34233.0 |
| pseudouridylate synthase | DF947_02275 | Not Available | Positive | 545596 - 546279 | 26401.1 |
| hypothetical protein | DF947_02280 | Not Available | Positive | 546318 - 547052 | 27223.7 |
| mate family efflux transporter | DF947_02285 | Not Available | Negative | 547279 - 548637 | 49187.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

