Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | DF947_21900 | Not Available | Positive | 4961591 - 4964782 | 116160.0 |
| ragb/susd family nutrient uptake outer membrane protein | DF947_21905 | Not Available | Positive | 4964794 - 4966449 | 61550.5 |
| laci family transcriptional regulator | DF947_21910 | Not Available | Positive | 4966669 - 4967673 | 37582.2 |
| glutaminase | DF947_21915 | Not Available | Positive | 4967888 - 4970332 | 91348.4 |
| hypothetical protein | DF947_21920 | Not Available | Positive | 4970508 - 4972646 | 80689.9 |
| alpha-mannosidase | DF947_21925 | Not Available | Positive | 4972669 - 4974936 | 85835.0 |
| rok family protein | DF947_21930 | Not Available | Positive | 4974999 - 4975886 | 31954.6 |
| atp/gtp-binding protein | DF947_21935 | Not Available | Positive | 4976613 - 4977173 | 20295.0 |
| susc/raga family tonb-linked outer membrane protein | DF947_21940 | Not Available | Positive | 4977310 - 4980507 | 115854.0 |
| ragb/susd family nutrient uptake outer membrane protein | DF947_21945 | Not Available | Positive | 4980519 - 4982345 | 67795.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

