Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DF947_21795 | Not Available | Negative | 4926164 - 4926346 | 6923.61 |
| hypothetical protein | DF947_21800 | Not Available | Negative | 4926497 - 4930528 | 153012.0 |
| 1,4-beta-xylanase | DF947_21805 | Not Available | Negative | 4930584 - 4931660 | 41743.8 |
| glycosyl hydrolase family 43 | DF947_21810 | Not Available | Negative | 4931699 - 4932745 | 39481.0 |
| glycosyl hydrolase family 43 | DF947_21815 | Not Available | Negative | 4932748 - 4933836 | 39830.8 |
| ragb/susd family nutrient uptake outer membrane protein | DF947_21820 | Not Available | Negative | 4933894 - 4935432 | 56663.4 |
| tonb-dependent receptor | DF947_21825 | Not Available | Negative | 4935449 - 4938616 | 114915.0 |
| alpha/beta hydrolase | DF947_21830 | Not Available | Negative | 4939141 - 4939962 | 30311.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DF947_21835 | Not Available | Negative | 4940278 - 4941711 | 52892.2 |
| susc/raga family tonb-linked outer membrane protein | DF947_21840 | Not Available | Negative | 4941722 - 4944895 | 114483.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

