Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DF947_21590 | Not Available | Negative | 4887924 - 4888142 | 8397.96 |
| 4-oxalocrotonate tautomerase | DF947_21595 | Not Available | Negative | 4888155 - 4888385 | 8607.19 |
| cupin domain-containing protein | DF947_21600 | Not Available | Negative | 4888388 - 4888798 | 15296.0 |
| nad(p)-dependent alcohol dehydrogenase | DF947_21605 | Not Available | Negative | 4888819 - 4889991 | 42623.4 |
| antibiotic biosynthesis monooxygenase | DF947_21610 | Not Available | Negative | 4889988 - 4890395 | 15235.8 |
| pyrroloquinoline quinone-dependent dehydrogenase | DF947_21615 | Not Available | Negative | 4890407 - 4892377 | 70822.3 |
| carboxymuconolactone decarboxylase | DF947_21620 | Not Available | Negative | 4892393 - 4893091 | 25178.6 |
| cupin domain-containing protein | DF947_21625 | Not Available | Negative | 4893127 - 4893600 | 17045.5 |
| oxidoreductase | DF947_21630 | Not Available | Negative | 4893731 - 4894489 | 26628.2 |
| arac family transcriptional regulator | DF947_21635 | Not Available | Positive | 4894649 - 4895545 | 34790.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

