Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DF947_21130 | Not Available | Positive | 4785392 - 4785907 | 19842.1 |
| uroporphyrinogen decarboxylase | DF947_21135 | Not Available | Positive | 4786128 - 4787153 | 38138.3 |
| hypothetical protein | DF947_21140 | Not Available | Positive | 4787236 - 4787415 | 6907.34 |
| type ii toxin-antitoxin system mrna interferase toxin, rele/stbe family | DF947_21145 | Not Available | Positive | 4787403 - 4787690 | 11117.3 |
| hypothetical protein | DF947_21150 | Not Available | Positive | 4787698 - 4787928 | 8602.59 |
| protoporphyrinogen ix oxidase | DF947_21155 | Not Available | Positive | 4787928 - 4788488 | 21547.6 |
| hypothetical protein | DF947_21160 | Not Available | Positive | 4788686 - 4789831 | 43809.2 |
| crp/fnr family transcriptional regulator | DF947_21165 | Not Available | Negative | 4789841 - 4790461 | 23647.5 |
| had family hydrolase | DF947_21170 | Not Available | Positive | 4790540 - 4791235 | 26497.0 |
| chloramphenicol acetyltransferase | DF947_21175 | Not Available | Positive | 4791232 - 4791879 | 24818.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

