Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter paludis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1583836 bp
Thymine Count
1566892 bp
Guanine Count
923446 bp
Cytosine Count
944055 bp
Genome Length
5018229 bp
Protein-coding Genes
4332 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mechanosensitive ion channel protein mscs | DF947_21080 | Not Available | Positive | 4774168 - 4775442 | 48679.4 |
| alpha/beta hydrolase | DF947_21085 | Not Available | Negative | 4775590 - 4776414 | 30703.5 |
| doxx family protein | DF947_21090 | Not Available | Negative | 4776777 - 4777157 | 14992.3 |
| glutamyl-trna reductase | DF947_21095 | Not Available | Positive | 4777285 - 4778511 | 46598.4 |
| hypothetical protein | DF947_21100 | Not Available | Negative | 4778526 - 4778816 | 11072.8 |
| hydroxymethylbilane synthase | DF947_21105 | Not Available | Positive | 4779021 - 4780601 | 58554.2 |
| porphobilinogen synthase | DF947_21110 | Not Available | Positive | 4780919 - 4781887 | 35977.2 |
| glutamate-1-semialdehyde-2,1-aminomutase | DF947_21115 | Not Available | Positive | 4782039 - 4783409 | 49682.5 |
| two-component sensor histidine kinase | DF947_21120 | Not Available | Positive | 4783813 - 4784679 | 32752.0 |
| dna-binding response regulator | DF947_21125 | Not Available | Positive | 4784688 - 4785392 | 27308.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

